Chicken Dinner-
10X coverage of a salmonella genome in 10minutes.
Nanopores.
GPU acceleration for real time basecalling and genome alignment.
This took a a few hours to turn a colony into a Nanopore motor protein adapter library but the sequencing pushed out a 70X genome in 40 minutes.
Next up,
Dozen at a time.
Took 1.8Gb of sequence from the Assembled it intro 1 contig.
Antibiotic resistance genes identified in an afternoon.
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Nice! 💪🏻