They are completely separate. Nostr.wine is just a normal pay-to-write relay. It has geographically distributed regional mirrors and is much easier to scale.

Filter’s goal is to be a PUBLIC relay aggregator/broadcaster and let users decide which paid/private relays they want to choose to be apart of individually.

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I get the difference but doesn’t filter read and write to nostr.wine? So isn’t specifying nostr.wine redundant if you’ve subscribed & set up filter?

No, filter only reads from the public relays in the readme list.